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DTSTART;TZID=America/Chicago:20251116T090000
DTEND;TZID=America/Chicago:20251116T173000
UID:submissions.supercomputing.org_SC25_sess209@linklings.com
SUMMARY:Frontiers in Generative AI for HPC Science and Engineering: Founda
 tions, Challenges, and Opportunities
DESCRIPTION:Realizing the promise of large-scale foundation models for sci
 entific discovery—enabling self-driving laboratories, hypothesis generatio
 n, and more—requires unprecedented computational scale and multidisciplina
 ry efforts to prepare diverse scientific data. While only a few organizati
 ons can train state-of-the-art models from scratch (e.g., trillions of par
 ameters, tens of trillions of tokens), advances in training strategies and
  fine-tuning have expanded accessibility. Simultaneously, breakthroughs in
  training methodologies and data quality are dramatically reducing trainin
 g costs and improving the performance of even smaller AI models. As AI mod
 els advance in general-purpose tasks, the scientific community is refining
  methods to evaluate and enhance their scientific reasoning capabilities, 
 a critical challenge for trustworthy AI in science. This workshop, catalyz
 ed by the Trillion Parameter Consortium (TPC), will highlight collaboratio
 ns in scientific skills evaluation, performance optimization, federated le
 arning, responsible AI, and other topics. SC24 drew 33 submissions, with 1
 3 presented to nearly 200 attendees, underscoring the rapid evolution of t
 his field.\n\nAfternoon Break - Frontiers in Generative AI for HPC Science
  and Engineering: Foundations, Challenges, and Opportunities\n------------
 ---------\nAn Update on TPC-Coordinated Global Collaborative Projects\n\nT
 PC Leaders will discuss progress on organizing and incubating collaborativ
 e TPC initiatives that will drive hackathons in 2026, including how these 
 initiatives inter-relate, a strategy for ensuring that they are applicatio
 n-driven, and how to get involved.\n\n---------------------\nAutomated MCQ
 A Benchmarking at Scale: Evaluating Reasoning Traces as Retrieval Sources 
 for Domain Adaptation of Small Language Models\n\nAs scientific knowledge 
 grows at an unprecedented pace, evaluation benchmarks must evolve to refle
 ct new discoveries and ensure language models are tested on current, diver
 se literature. We propose a scalable, modular framework for generating mul
 tiple-choice question-answering (MCQA) benchmarks dire...\n\n\nOzan Gokdem
 ir (University of Chicago, Argonne National Laboratory (ANL)) and Neil Get
 ty, Robert Underwood, Sandeep Madireddy, Franck Cappello, Arvind Ramanatha
 n, Ian Foster, and Rick Stevens (Argonne National Laboratory (ANL))\n-----
 ----------------\nBatch Tiling on Attention: Efficient Mixture of Experts 
 Training on Wafer-Scale Processors\n\nMixture of Experts (MoE) models face
  computational bottlenecks on wafer-scale processors due to conflicting ba
 tch size requirements: attention mechanisms need smaller batches for memor
 y constraints, while routable MLP layers require larger batches for optima
 l compute density.\nWe introduce \textbf{Ba...\n\n\nDaria Soboleva, Etienn
 e Goffinet, Hui Zeng, Sangamesh Ragate, Elif Albuz, and Natalia Vassilieva
  (Cerebras)\n---------------------\nBioR5: A Three-Layer Architecture for 
 Biological Reasoning in Scientific AI\n\nBiological research requires dive
 rse reasoning modes, from phylogenetic analysis to mechanistic understandi
 ng, each demanding specific methods and data types. Current AI systems typ
 ically employ single methodologies, limiting effectiveness in complex biol
 ogical domains. We present BioR5, a three-lay...\n\n\nPeng Ding (Universit
 y of Chicago, Argonne National Laboratory (ANL)); Thomas Brettin (Argonne 
 National Laboratory (ANL)); and Rick Stevens (Argonne National Laboratory 
 (ANL), University of Chicago)\n---------------------\nChatEED: An agentic 
 retrieval assistant for accelerator operators\n\nScientists and operators 
 at SLAC National Accelerator Laboratory rely on electronic logbooks (ELOGs
 ) to record and share information surrounding accelerator operations. Howe
 ver, since creating log entries is time-consuming and complex, they are of
 ten brief, incomplete, jargonized, and inconsistent. ...\n\n\nAaron Reed, 
 Claudio Bisegni, Sandesh Shrestha, Michelle Huang, and Daniel Ratner (SLAC
  National Accelerator Laboratory)\n---------------------\nGridMind: LLMs-P
 owered Agents for Power System Analysis and Operations\n\nThe complexity o
 f traditional power system analysis workflows presents significant barrier
 s to efficient decision-making in modern electric grids. This paper presen
 ts GridMind, a multi-agent AI system that integrates Large Language Models
  (LLMs) with deterministic engineering solvers to enable conve...\n\n\nHon
 gwei Jin, Kibaek Kim, and Jonghwan Kwon (Argonne National Laboratory (ANL)
 )\n---------------------\nEQSIM Agent: A Conversational AI for Interactive
  Exploration of Large-scale Earthquake Simulation Data\n\nLarge-scale eart
 hquake simulations produce massive, high-fidelity datasets essential for s
 eismic risk analysis, however, their volume and complexity create a barrie
 r for researchers from various backgrounds who lack specialized knowledge 
 and programming skills. To address this challenge, we leverage...\n\n\nHou
 jun Tang and David McCallen (Lawrence Berkeley National Laboratory (LBNL))
 \n---------------------\nEvaluation of Test-Time Compute Constraints on Sa
 fety and Skill Large Reasoning Models\n\nTest-time compute scaling has dem
 onstrated the ability to improve the performance of reasoning language mod
 els by generating longer chain-of-thought (CoT) sequences. However, this i
 ncrease in performance comes with a significant increase in computation co
 st. In this work, we investigate two compute ...\n\n\nAdarsha Balaji, Le C
 hen, Rajeev Thakur, Franck Cappello, and Sandeep Madireddy (Argonne Nation
 al Laboratory (ANL))\n---------------------\nFrameworks for Large Language
  Model Serving in HPC Environments\n\nWe introduce open-source frameworks 
 for deploying and running large language models (LLMs) within high-perform
 ance computing (HPC) environments. One such framework targets high-\nthrou
 ghput batch inference, enabling users to submit LLM requests in an OpenAI-
 compatible format as traditional HPC jobs. ...\n\n\nRohan Marwaha (Univers
 ity of Illinois at Urbana-Champaign); Qinren Zhou (University of Illinois 
 at Urbana-Champaign, National Center for Supercomputing Applications (NCSA
 )); Kastan Day and Asmita Dabholkar (University of Illinois at Urbana-Cham
 paign); and Volodymyr Kindratenko (University of Illinois at Urbana-Champa
 ign, National Center for Supercomputing Applications (NCSA))\n------------
 ---------\nFrontiers in Generative AI for HPC Science and Engineering: Fou
 ndations, Challenges, and Opportunities\n\nRealizing the promise of large-
 scale foundation models for scientific discovery—enabling self-driving lab
 oratories, hypothesis generation, and more—requires unprecedented computat
 ional scale and multidisciplinary efforts to prepare diverse scientific da
 ta. While only a few organizations ...\n\n\nCharlie Catlett (Argonne Natio
 nal Laboratory (ANL), University of Chicago); Fabrizio Gagliardi (Barcelon
 a Supercomputing Center (BSC)); Valerie Taylor (Argonne National Laborator
 y (ANL), Univeristy of Chicago); Laura Morselli (CINECA); and Rio Yokota (
 Institute of Science Tokyo)\n---------------------\nBeyond End-to-End: Und
 erstanding the Limits of LLMs in Scientific Problem Solving\n\nMultimodal 
 large language models (MLLMs) are now widely used across many applications
 , including scientific question answering that requires combining visual a
 nd textual inputs. However, existing benchmarks in this area are mostly en
 d-to-end, making it difficult to pinpoint where models fail. To add...\n\n
 \nYouyuan Liu (Temple University); Sheng Di, Neil Getty, Tanwi Mallick, an
 d Robert Underwood (Argonne National Laboratory (ANL)); and Sian Jin (Temp
 le University)\n---------------------\nExploring Distributed Vector Databa
 ses Performance on HPC Platforms: A Study with Qdrant\n\nVector databases 
 have rapidly grown in popularity, enabling efficient similarity search ove
 r data such as text, images, and video. They now play a central role in mo
 dern AI workflows, aiding large language models by grounding model outputs
  in external literature through retrieval-augmented generatio...\n\n\nSeth
  Ockerman (University of Wisconsin-Madison, Argonne National Laboratory (A
 NL)); Amal Gueroudji (Argonne National Laboratory (ANL)); Song Young Oh (U
 niversity of Chicago); Robert Underwood and Nicholas Chia (Argonne Nationa
 l Laboratory (ANL)); Kyle Chard (University of Chicago, Argonne National L
 aboratory (ANL)); Robert Ross (Argonne National Laboratory (ANL)); and Shi
 varam Venkataraman (University of Wisconsin-Madison)\n--------------------
 -\nLABMATE: Language Model Based Multi-Agent System to Accelerate Catalysi
 s Experiments\n\nLarge Language Models (LLMs) are unreliable to make decis
 ions due to their potential to hallucinate, and unable to perform complex 
 tasks like running simulations essential to fields like Material Science. 
 We introduce LABMATE (LAnguage model Based Multi-agent system to Accelerat
 e caTalysis Experimen...\n\n\nAnurag Acharya (Pacific Northwest National L
 aboratory (PNNL)); Anshu Kiran Sharma (Florida International University, P
 acific Northwest National Laboratory (PNNL)); and Derek Parker, Timothy Ve
 ga, Rizwan A. Ashraf, Natalie M. Isenberg, Jan Strube, and Robert Rallo (P
 acific Northwest National Laboratory (PNNL))\n---------------------\nAgent
 ic AI vs ML-based Autotuning: A Comparative Study for Loop Reordering Opti
 mization\n\nHigh Performance Computing (HPC)  applications rely heavily on
  code optimizations to achieve good performance on modern CPU and GPU arch
 itectures. Traditional Machine Learning autotuning approaches have demonst
 rated success in exploring high-dimensional spaces, but they often require
  expensive compi...\n\n\nMiguel Romero Rosas (University of Delaware), Kha
 led Ibrahim (Lawrence Berkeley National Laboratory (LBNL)), and Rudolf Eig
 enmann (University of Delaware)\n---------------------\nWorkshop Welcome a
 nd Overview\n\nWorkshop organizers will provide an overview of the objecti
 ves and program as well as the international Trillion Parameter Consortium
  and opportunities to engage.\n\n\nJavier Aula-Blasco (Barcelona Supercomp
 uting Center (BSC))\n---------------------\nMorning Break - Frontiers in G
 enerative AI for HPC Science and Engineering: Foundations, Challenges, and
  Opportunities\n---------------------\nLunch break (on your own)\n\nRecord
 ing: Livestreamed, Recorded\n\nRegistration Category: Technical Program Re
 g Pass, Workshop Reg Pass\n\nSession Chairs: Charlie Catlett (Argonne Nati
 onal Laboratory (ANL), University of Chicago); Javier Aula-Blasco (Barcelo
 na Supercomputing Center (BSC)); Valerie Taylor (Argonne National Laborato
 ry (ANL), University of Chicago); Laura Morselli (CINECA); and Rio Yokota 
 (Institute of Science Tokyo)
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